Week 1 |
Recitation: Surveys and Intro |
Lab: Survey and Intro |
| 1/27 |
1 |
1.Introduction to the class
1.1The disciplines: Physics, Biology, Chemistry, and Math
1.1.1Science as making models
1.1.4What Physics can do for Biologists
1.2 Thinking about Thinking and Knowing
1.2.1 The nature of scientific knowledge
|
Introduction to the Class |
|
| 1/29 |
2 |
6.4.1 Energy at the sub-molecular level
6.4.2 Atomic and Molecular
forces
|
Physics Perspective on Chemical Bonds |
|
| 1/31 |
3 |
|
Physics Perspective on Chemical Energy |
|
Week 2 |
Recitation: |
Lab 6: Modeling Fluid Flow |
| 2/3 |
4 |
Interlude 2: The Micro to Macro Connection
7. Thermodynamics and Statistical Physics
7.1 Kinetic theory: the ideal gas law
7.2 The 1st law of thermodynamics
|
First Law |
Quiz 1 |
| 2/5 |
5 |
7.2.1Organizing the idea of energy
7.2.2Enthalpy
|
Energy Sharing and Distributions |
|
| 2/7 |
6 |
7.2.3Thermodynamic equilibrium and equipartition
7.3.1The 2nd law of thermodynamics: a probabilistic law
|
Energy Sharing and Distributions |
|
Week 3 |
Recitation: |
Lab 6: Modeling Fluid Flow |
| 2/10 |
7 |
7.3The 2nd law of thermodynamics
7.3.2Implications of the second law of thermodynamics: entropy
7.3.2.1Why entropy is logarithmic
7.3.2.2Consequences of the second law of thermodynamics
|
Entropy |
Quiz 2 |
| 2/12 |
8 |
7.3.2.3A way to think about entropy -- sharing
7.3.2.4Entropy and heat flow
|
Second Law of Thermodynamics |
|
| 2/14 |
9 |
7.3.3 Free energy
7.3.3.1Motivating the Gibbs free energy
7.3.3.2Gibbs free energy
|
Free Energy |
|
Week 4 |
Recitation: |
Lab 7: Analyzing electric forces in a fluid |
| 2/17 |
10 |
7.3.4 How energy is distributed
7.3.4.1Boltzmann distribution
7.3.4.2Boltzmann distribution and Gibbs free energy
7.3.4 How energy is distributed
| Free Energy Examples |
|
| 2/19 |
11 |
4.2.4Electric forces
4.2.4.1Charge and the structure of matter
4.2.4.2Polarization
4.2.4.3Coulomb's law
|
Gibbs Free Energy |
Quiz 3 |
| 2/21 |
12 |
4.2.4.3.1Coulomb's law -- vector character
4.2.4.3.2Reading the content in Coulomb's law
4.2.4.4The electric field
| Charges and Force |
|
Week 5 |
Recitation |
Lab 7: Analyzing electric forces in a fluid |
| 2/24 |
13 |
8.1The electric field
8.1.1The concept of field (technical)
8.1.2Making sense of the idea of field
| TBA |
Quiz 3' |
| 2/26 |
14 |
Energy sharing model
Review for Exam1 -Sample Questions |
Review |
|
| 2/28 |
15 |
No HW due |
MID TERM 1 |
|
Week 6 |
Recitation: |
Lab8 : Modeling signal transmission along nerve axons |
| 3/3 |
16 |
|
Go over midterm |
|
| 3/5 |
17 |
8.2The electric potential
8.2.1.1A simple electric model: a line of charge
8.2.1.1.1Line charge integral (technical)
8.2.1.2A simple electric model: a sheet of charge
|
Electrostatic potential |
|
| 3/7 |
18 |
8.4.2The capacitor
|
Capacitor |
|
Week 7 |
Recitation: |
Lab 8: Modeling signal transmission along nerve axons |
| 3/10 |
19 |
8.5Electric current
8.5.1Quantifying electric current
8.5.2Resistive electric flow: Ohm's law
|
Moving Charges: Current |
Quiz 5 |
| 3/12 |
20 |
8.5.3Ways to think about current: A toolbox of models
8.5.4Kirchoff's principles
|
Kirchoff's principles |
|
| 3/14 |
21 |
8.5.4.1 Applying Kirchoff: Examples
8.5.5Electrical energy and power
|
Electrical energy and power |
|
Week 8 |
Recitation: |
Lab 9: Geometric optics |
| 3/24 |
22 |
8.3.1Screening of electrical interactions in salt solution
8.3.1.1Debye length
8.3.2Nernst potential
|
Electric Interactions in Fluids and the Nernst Potential |
Quiz 6 |
| 3/26 |
23 |
9.Oscillations and Waves
9.1Harmonic Oscillation
9.1.1Mass on a spring
9.1.1.1Hanging mass on a spring
9.1.1.2The pendulum
|
Notes on Debye Length |
|
| 3/28 |
24 |
Catching Up
|
Oscillations |
|
Week 9 |
Recitation: |
Lab 9: Geometric optics |
| 3/31 |
25 |
Catching Up
|
tba |
Quiz 7 |
| 4/2 |
26 |
9.1.2Damped Oscillators
9.1.2.1Damped oscillators - the math (technical)
9.1.3Driven harmonic oscillators: resonance
9.1.5Quantum Oscillators -- discrete states
|
Oscillations |
|
| 4/4 |
27 |
9.2Waves in 1D
9.2.1Waves on an elastic string
9.2.2Wave pulses
9.2.2.1Propagating a wave pulse - the math
|
tba |
|
Week 10 |
Recitation: |
Lab 10: Analyzing light spectra and exploring implications
for living systems |
| 4/7 |
28 |
9.2.3Wave speed
9.2.4Superposition of waves in 1D
|
Waves |
Quiz 8 |
| 4/9 |
29 |
Review for Exam2 -Sample Questions |
Review 2 |
|
| 4/11 |
30 |
|
MID TERM 2 |
|
Week 11 |
Recitation: |
Lab 10: Analyzing light spectra and exploring implications
for living system |
| 4/14 |
31 |
|
Go over midterm |
|
| 4/16 |
32 |
9.2.5Sinusoidal waves
9.3.1The nature of sound
9.3.2Analyzing sounds
|
sinusoidal waves and sound |
|
| 4/18 |
33 |
10Three models of light
|
Light |
|
Week 12 |
Recitation: |
Lab 11: Exploring complex absorption and emission
in molecules |
| 4/21 |
34 |
10.1The ray model of light
10.1.1Basic principles of the ray model
|
Three models of light |
Quiz 9 |
| 4/23 |
35 |
10.1.2Flat mirrors
10.1.3Curved mirrors
10.1.3.1Curved mirror equations
10.1.4Lenses
|
Light |
|
| 4/25 |
36 |
10.1.4.1Lens equations
10.1.5 The eye
10.1.6 Optical instruments
|
Refraction and Lenses |
|
Week 13 |
Recitation: |
Lab 11: Exploring complex absorption and emission
in molecules |
| 4/28 |
37 |
10.2The wave model of light
10.2.1Electromagnetic radiation and Maxwell's rainbow
10.2.3Two-slit interference
|
Reflection |
Quiz 10 |
| 4/30 |
38 |
|
tba |
|
| 5/2 |
39 |
Guest Lecture: Alison Sweeney, UPenn
|
tba |
|
Week 14 |
Recitation: |
Lab: Makeup Labs and Surveys |
| 5/5 |
40 |
10.2.4Diffraction
10.2.4.1Interference from two wide slits
|
Interference and diffraction |
Quiz 11 |
| 5/7 |
41 |
10.3The photon model of light
10.3.1Basic principles of the photon model
10.3.1.1Reconciling the wave and photon model - sort of
|
Photon Model |
|
| 5/9 |
42 |
10.4Color and light
10.5 Interactions of light with matter
10.5.1Visual implications
|
Quantization |
|
Week 15 |
Recitation: |
Lab: Makeup Labs and Surveys |
| 5/12 |
43 |
|
Sample Final Questions |
|
Final Exam |
tba |
| |
